Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx3P70354 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.87□□□□□ -0.03
Msx3P70354 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx3P70354 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Msx3P70354 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Msx3P70354 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Msx3P70354 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.86□□□□□ -0.03
Msx3P70354 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Msx3P70354 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Msx3P70354 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Msx3P70354 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.86□□□□□ -0.03
Msx3P70354 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Msx3P70354 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.86□□□□□ -0.03
Msx3P70354 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Msx3P70354 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.86□□□□□ -0.03
Msx3P70354 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Msx3P70354 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Msx3P70354 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Msx3P70354 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.86□□□□□ -0.03
Msx3P70354 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Msx3P70354 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Msx3P70354 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Msx3P70354 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Msx3P70354 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Msx3P70354 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.85□□□□□ -0.03
Msx3P70354 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Msx3P70354 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Msx3P70354 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Msx3P70354 Gm10275-202ENSMUST00000168697 495 ntBASIC14.85□□□□□ -0.03
Msx3P70354 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.85□□□□□ -0.03
Msx3P70354 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Gm10275-201ENSMUST00000092620 635 ntBASIC14.85□□□□□ -0.03
Msx3P70354 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Msx3P70354 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Msx3P70354 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Msx3P70354 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Msx3P70354 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Msx3P70354 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Msx3P70354 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Msx3P70354 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.84□□□□□ -0.03
Msx3P70354 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.84□□□□□ -0.03
Msx3P70354 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.84□□□□□ -0.03
Msx3P70354 Gm11025-201ENSMUST00000140773 466 ntBASIC14.84□□□□□ -0.03
Msx3P70354 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.84□□□□□ -0.03
Msx3P70354 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.84□□□□□ -0.03
Msx3P70354 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms