Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ybx1P62960 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ybx1P62960 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ybx1P62960 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ybx1P62960 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.78□□□□□ -0.04
Ybx1P62960 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ybx1P62960 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ybx1P62960 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ybx1P62960 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ybx1P62960 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.78□□□□□ -0.04
Ybx1P62960 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.78□□□□□ -0.04
Ybx1P62960 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ybx1P62960 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.78□□□□□ -0.04
Ybx1P62960 Gm28760-201ENSMUST00000185995 736 ntBASIC14.78□□□□□ -0.04
Ybx1P62960 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ybx1P62960 Gm37917-201ENSMUST00000194711 392 ntBASIC14.78□□□□□ -0.04
Ybx1P62960 Gm43433-201ENSMUST00000196573 481 ntBASIC14.78□□□□□ -0.04
Ybx1P62960 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.78□□□□□ -0.04
Ybx1P62960 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.78□□□□□ -0.04
Ybx1P62960 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.78□□□□□ -0.04
Ybx1P62960 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ybx1P62960 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.78□□□□□ -0.04
Ybx1P62960 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ybx1P62960 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ybx1P62960 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ybx1P62960 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ybx1P62960 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ybx1P62960 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ybx1P62960 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ybx1P62960 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ybx1P62960 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ybx1P62960 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ybx1P62960 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.77□□□□□ -0.04
Ybx1P62960 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ybx1P62960 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.77□□□□□ -0.05
Ybx1P62960 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.77□□□□□ -0.05
Ybx1P62960 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.77□□□□□ -0.05
Ybx1P62960 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.77□□□□□ -0.05
Ybx1P62960 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.77□□□□□ -0.05
Ybx1P62960 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.77□□□□□ -0.05
Ybx1P62960 Gm6916-202ENSMUST00000205523 195 ntBASIC14.77□□□□□ -0.05
Ybx1P62960 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.77□□□□□ -0.05
Ybx1P62960 Gm15823-201ENSMUST00000064305 670 ntBASIC14.77□□□□□ -0.05
Ybx1P62960 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ybx1P62960 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.77□□□□□ -0.05
Ybx1P62960 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ybx1P62960 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ybx1P62960 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ybx1P62960 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ybx1P62960 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ybx1P62960 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ybx1P62960 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ybx1P62960 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.76□□□□□ -0.05
Ybx1P62960 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ybx1P62960 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.76□□□□□ -0.05
Ybx1P62960 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ybx1P62960 Gm25857-201ENSMUST00000082788 129 ntBASIC14.76□□□□□ -0.05
Ybx1P62960 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Ybx1P62960 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ybx1P62960 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 BC001981-202ENSMUST00000191393 1545 ntBASIC14.76□□□□□ -0.05
Ybx1P62960 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Sybu-209ENSMUST00000228639 4113 ntBASIC14.76□□□□□ -0.05
Ybx1P62960 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ybx1P62960 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ybx1P62960 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.75□□□□□ -0.05
Ybx1P62960 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms