Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.34□□□□□ -0.75
Cks1bP61025 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.34□□□□□ -0.75
Cks1bP61025 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Gm7367-201ENSMUST00000057611 492 ntBASIC10.34□□□□□ -0.75
Cks1bP61025 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cks1bP61025 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.34□□□□□ -0.75
Cks1bP61025 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cks1bP61025 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cks1bP61025 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cks1bP61025 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cks1bP61025 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1bP61025 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.33□□□□□ -0.76
Cks1bP61025 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Pck2-205ENSMUST00000226352 2784 ntBASIC10.33□□□□□ -0.76
Cks1bP61025 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.33□□□□□ -0.76
Cks1bP61025 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Cks1bP61025 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.33□□□□□ -0.76
Cks1bP61025 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Gm9013-201ENSMUST00000132939 882 ntBASIC10.33□□□□□ -0.76
Cks1bP61025 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.33□□□□□ -0.76
Cks1bP61025 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cks1bP61025 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1bP61025 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1bP61025 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cks1bP61025 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.32□□□□□ -0.76
Cks1bP61025 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.32□□□□□ -0.76
Cks1bP61025 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Cks1bP61025 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cks1bP61025 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cks1bP61025 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cks1bP61025 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1bP61025 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.32□□□□□ -0.76
Cks1bP61025 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms