Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sf3b6P59708 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.82□□□□□ -0.36
Sf3b6P59708 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sf3b6P59708 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sf3b6P59708 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.82□□□□□ -0.36
Sf3b6P59708 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sf3b6P59708 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.82□□□□□ -0.36
Sf3b6P59708 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.82□□□□□ -0.36
Sf3b6P59708 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Gm4535-201ENSMUST00000182274 558 ntBASIC12.82□□□□□ -0.36
Sf3b6P59708 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.82□□□□□ -0.36
Sf3b6P59708 Gm9682-201ENSMUST00000197505 556 ntBASIC12.82□□□□□ -0.36
Sf3b6P59708 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.82□□□□□ -0.36
Sf3b6P59708 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Gm10355-201ENSMUST00000097146 517 ntBASIC12.82□□□□□ -0.36
Sf3b6P59708 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3b6P59708 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sf3b6P59708 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sf3b6P59708 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Sf3b6P59708 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.81□□□□□ -0.36
Sf3b6P59708 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Olfr286-202ENSMUST00000205305 969 ntBASIC12.81□□□□□ -0.36
Sf3b6P59708 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.81□□□□□ -0.36
Sf3b6P59708 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sf3b6P59708 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sf3b6P59708 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sf3b6P59708 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.81□□□□□ -0.36
Sf3b6P59708 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3b6P59708 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sf3b6P59708 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Gm7862-201ENSMUST00000121461 292 ntBASIC12.8□□□□□ -0.36
Sf3b6P59708 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.8□□□□□ -0.36
Sf3b6P59708 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms