Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Gm6443-201ENSMUST00000203599 874 ntBASIC14.02□□□□□ -0.17
Hnf4aP49698 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.02□□□□□ -0.17
Hnf4aP49698 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.02□□□□□ -0.17
Hnf4aP49698 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hnf4aP49698 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hnf4aP49698 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Hnf4aP49698 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Hnf4aP49698 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Gm14042-201ENSMUST00000120139 833 ntBASIC14.01□□□□□ -0.17
Hnf4aP49698 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.01□□□□□ -0.17
Hnf4aP49698 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Gm27525-201ENSMUST00000184465 107 ntBASIC14.01□□□□□ -0.17
Hnf4aP49698 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.01□□□□□ -0.17
Hnf4aP49698 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Gm45098-201ENSMUST00000207179 657 ntBASIC14.01□□□□□ -0.17
Hnf4aP49698 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.01□□□□□ -0.17
Hnf4aP49698 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hnf4aP49698 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hnf4aP49698 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14□□□□□ -0.17
Hnf4aP49698 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14□□□□□ -0.17
Hnf4aP49698 Rpph1-201ENSMUST00000175096 319 ntBASIC14□□□□□ -0.17
Hnf4aP49698 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14□□□□□ -0.17
Hnf4aP49698 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14□□□□□ -0.17
Hnf4aP49698 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hnf4aP49698 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hnf4aP49698 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hnf4aP49698 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hnf4aP49698 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.99□□□□□ -0.17
Hnf4aP49698 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hnf4aP49698 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hnf4aP49698 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hnf4aP49698 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hnf4aP49698 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hnf4aP49698 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms