Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Gm6222-201ENSMUST00000120787 396 ntBASIC13.67□□□□□ -0.22
Nkx2-6P43688 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Gm3436-201ENSMUST00000179930 840 ntBASIC13.67□□□□□ -0.22
Nkx2-6P43688 Gm5745-201ENSMUST00000183748 313 ntBASIC13.67□□□□□ -0.22
Nkx2-6P43688 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.67□□□□□ -0.22
Nkx2-6P43688 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.67□□□□□ -0.22
Nkx2-6P43688 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-6P43688 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-6P43688 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.66□□□□□ -0.22
Nkx2-6P43688 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Gm27631-201ENSMUST00000184163 466 ntBASIC13.66□□□□□ -0.22
Nkx2-6P43688 Dupd1-202ENSMUST00000224735 548 ntBASIC13.66□□□□□ -0.22
Nkx2-6P43688 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-6P43688 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.66□□□□□ -0.22
Nkx2-6P43688 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Gm16215-201ENSMUST00000161990 637 ntBASIC13.65□□□□□ -0.22
Nkx2-6P43688 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.65□□□□□ -0.22
Nkx2-6P43688 Gm28631-201ENSMUST00000190740 334 ntBASIC13.65□□□□□ -0.22
Nkx2-6P43688 Gm45453-201ENSMUST00000211758 853 ntBASIC13.65□□□□□ -0.22
Nkx2-6P43688 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.65□□□□□ -0.22
Nkx2-6P43688 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms