Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.57□□□□□ -0.08
Fen1P39749 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Fen1P39749 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.57□□□□□ -0.08
Fen1P39749 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.57□□□□□ -0.08
Fen1P39749 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.57□□□□□ -0.08
Fen1P39749 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.57□□□□□ -0.08
Fen1P39749 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Fen1P39749 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
Fen1P39749 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Fen1P39749 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Fen1P39749 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Fen1P39749 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Gm27459-201ENSMUST00000184860 107 ntBASIC14.56□□□□□ -0.08
Fen1P39749 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.56□□□□□ -0.08
Fen1P39749 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.56□□□□□ -0.08
Fen1P39749 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.56□□□□□ -0.08
Fen1P39749 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Fen1P39749 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.56□□□□□ -0.08
Fen1P39749 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fen1P39749 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Fen1P39749 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.55□□□□□ -0.08
Fen1P39749 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Fen1P39749 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Fen1P39749 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Fen1P39749 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Fen1P39749 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.55□□□□□ -0.08
Fen1P39749 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.55□□□□□ -0.08
Fen1P39749 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Fen1P39749 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Fen1P39749 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Fen1P39749 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Fen1P39749 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fen1P39749 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Fen1P39749 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.54□□□□□ -0.08
Fen1P39749 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Fen1P39749 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Fen1P39749 Gm11780-201ENSMUST00000136880 516 ntBASIC14.54□□□□□ -0.08
Fen1P39749 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.54□□□□□ -0.08
Fen1P39749 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.54□□□□□ -0.08
Fen1P39749 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms