Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.38□□□□□ -0.27
Thbs1P35441 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.38□□□□□ -0.27
Thbs1P35441 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Thbs1P35441 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Thbs1P35441 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Thbs1P35441 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Thbs1P35441 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.37□□□□□ -0.27
Thbs1P35441 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.37□□□□□ -0.27
Thbs1P35441 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.37□□□□□ -0.27
Thbs1P35441 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.37□□□□□ -0.27
Thbs1P35441 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.37□□□□□ -0.27
Thbs1P35441 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.37□□□□□ -0.27
Thbs1P35441 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.37□□□□□ -0.27
Thbs1P35441 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.37□□□□□ -0.27
Thbs1P35441 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.37□□□□□ -0.27
Thbs1P35441 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Thbs1P35441 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.37□□□□□ -0.27
Thbs1P35441 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs1P35441 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Thbs1P35441 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.36□□□□□ -0.27
Thbs1P35441 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.36□□□□□ -0.27
Thbs1P35441 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
Thbs1P35441 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.36□□□□□ -0.27
Thbs1P35441 Mir3113-201ENSMUST00000175478 76 ntBASIC13.36□□□□□ -0.27
Thbs1P35441 Gm27920-201ENSMUST00000183953 96 ntBASIC13.36□□□□□ -0.27
Thbs1P35441 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.36□□□□□ -0.27
Thbs1P35441 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.36□□□□□ -0.27
Thbs1P35441 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.36□□□□□ -0.27
Thbs1P35441 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.36□□□□□ -0.27
Thbs1P35441 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Thbs1P35441 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs1P35441 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thbs1P35441 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thbs1P35441 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thbs1P35441 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thbs1P35441 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thbs1P35441 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thbs1P35441 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Thbs1P35441 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms