Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccl6P27784 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.29□□□□□ -0.6
Ccl6P27784 Gm11779-201ENSMUST00000118541 368 ntBASIC11.29□□□□□ -0.6
Ccl6P27784 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Gm2272-201ENSMUST00000194903 582 ntBASIC11.29□□□□□ -0.6
Ccl6P27784 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccl6P27784 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Ccl6P27784 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ccl6P27784 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.28□□□□□ -0.6
Ccl6P27784 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl6P27784 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccl6P27784 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl6P27784 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl6P27784 Mir3113-201ENSMUST00000175478 76 ntBASIC11.28□□□□□ -0.6
Ccl6P27784 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl6P27784 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.28□□□□□ -0.6
Ccl6P27784 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl6P27784 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl6P27784 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl6P27784 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl6P27784 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl6P27784 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl6P27784 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Ccl6P27784 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl6P27784 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl6P27784 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl6P27784 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl6P27784 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.27□□□□□ -0.6
Ccl6P27784 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl6P27784 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Ccl6P27784 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl6P27784 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Gm14494-201ENSMUST00000118786 435 ntBASIC11.27□□□□□ -0.61
Ccl6P27784 Gm15467-201ENSMUST00000120582 445 ntBASIC11.27□□□□□ -0.61
Ccl6P27784 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Gm16026-204ENSMUST00000162652 683 ntBASIC11.27□□□□□ -0.61
Ccl6P27784 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ccl6P27784 Gm17271-201ENSMUST00000165535 355 ntBASIC11.27□□□□□ -0.61
Ccl6P27784 Gm9726-201ENSMUST00000180321 678 ntBASIC11.27□□□□□ -0.61
Ccl6P27784 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl6P27784 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccl6P27784 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.27□□□□□ -0.61
Ccl6P27784 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl6P27784 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms