Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.21□□□□□ -0.61
Ccl1P10146 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Gm15358-201ENSMUST00000119249 520 ntBASIC11.21□□□□□ -0.61
Ccl1P10146 Gm9013-201ENSMUST00000132939 882 ntBASIC11.21□□□□□ -0.61
Ccl1P10146 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.21□□□□□ -0.61
Ccl1P10146 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.21□□□□□ -0.61
Ccl1P10146 Gm43799-201ENSMUST00000201845 579 ntBASIC11.21□□□□□ -0.61
Ccl1P10146 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.21□□□□□ -0.61
Ccl1P10146 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ccl1P10146 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl1P10146 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Ccl1P10146 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.2□□□□□ -0.62
Ccl1P10146 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ccl1P10146 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.2□□□□□ -0.62
Ccl1P10146 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Rprl3-201ENSMUST00000157400 290 ntBASIC11.2□□□□□ -0.62
Ccl1P10146 Gm25745-201ENSMUST00000174945 133 ntBASIC11.2□□□□□ -0.62
Ccl1P10146 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Gm45328-201ENSMUST00000210942 917 ntBASIC11.2□□□□□ -0.62
Ccl1P10146 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ccl1P10146 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccl1P10146 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl1P10146 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl1P10146 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Ccl1P10146 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl1P10146 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.19□□□□□ -0.62
Ccl1P10146 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl1P10146 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms