Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm22171-201ENSMUST00000179283 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm23936-201ENSMUST00000179354 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm22619-201ENSMUST00000179516 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm25255-201ENSMUST00000179579 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm24755-201ENSMUST00000179691 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm26506-201ENSMUST00000179692 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm25086-201ENSMUST00000179931 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm23243-201ENSMUST00000180047 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm24659-201ENSMUST00000180212 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm24169-201ENSMUST00000180244 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm23689-201ENSMUST00000180354 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm27359-201ENSMUST00000184153 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm27785-201ENSMUST00000184268 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm27466-201ENSMUST00000184396 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm27703-201ENSMUST00000184836 110 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm18049-201ENSMUST00000208909 581 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PtcraP0C6B2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.56□□□□□ -0.4
PtcraP0C6B2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
PtcraP0C6B2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PtcraP0C6B2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.55□□□□□ -0.4
PtcraP0C6B2 Gm43125-201ENSMUST00000201724 730 ntBASIC12.55□□□□□ -0.4
PtcraP0C6B2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.55□□□□□ -0.4
PtcraP0C6B2 Chchd1-203ENSMUST00000224633 557 ntBASIC12.55□□□□□ -0.4
PtcraP0C6B2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.55□□□□□ -0.4
PtcraP0C6B2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PtcraP0C6B2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
PtcraP0C6B2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
PtcraP0C6B2 Gm12882-201ENSMUST00000121696 517 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms