Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.89□□□□□ -0.35
P06344 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.89□□□□□ -0.35
P06344 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.89□□□□□ -0.35
P06344 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P06344 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
P06344 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
P06344 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
P06344 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.88□□□□□ -0.35
P06344 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Gm18766-201ENSMUST00000189811 808 ntBASIC12.88□□□□□ -0.35
P06344 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.88□□□□□ -0.35
P06344 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
P06344 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
P06344 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
P06344 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
P06344 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
P06344 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
P06344 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
P06344 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.88□□□□□ -0.35
P06344 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.88□□□□□ -0.35
P06344 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P06344 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
P06344 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
P06344 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
P06344 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
P06344 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Gm8410-201ENSMUST00000117225 605 ntBASIC12.87□□□□□ -0.35
P06344 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.87□□□□□ -0.35
P06344 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.87□□□□□ -0.35
P06344 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.87□□□□□ -0.35
P06344 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
P06344 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.87□□□□□ -0.35
P06344 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.87□□□□□ -0.35
P06344 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
P06344 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06344 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.86□□□□□ -0.35
P06344 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
P06344 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Gm13823-201ENSMUST00000119930 345 ntBASIC12.86□□□□□ -0.35
P06344 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms