Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06323 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.72□□□□□ -0.53
P06323 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
P06323 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.72□□□□□ -0.53
P06323 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.72□□□□□ -0.53
P06323 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.72□□□□□ -0.53
P06323 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.72□□□□□ -0.53
P06323 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.72□□□□□ -0.53
P06323 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.72□□□□□ -0.53
P06323 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
P06323 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Gm10819-201ENSMUST00000099988 561 ntBASIC11.72□□□□□ -0.53
P06323 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
P06323 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P06323 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P06323 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.72□□□□□ -0.53
P06323 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.72□□□□□ -0.53
P06323 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06323 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.71□□□□□ -0.53
P06323 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P06323 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P06323 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.71□□□□□ -0.53
P06323 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Gm13036-201ENSMUST00000117799 748 ntBASIC11.71□□□□□ -0.53
P06323 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.71□□□□□ -0.53
P06323 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.71□□□□□ -0.53
P06323 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.71□□□□□ -0.53
P06323 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.71□□□□□ -0.53
P06323 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.71□□□□□ -0.53
P06323 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06323 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
P06323 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.71□□□□□ -0.54
P06323 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06323 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06323 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
P06323 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P06323 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P06323 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06323 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P06323 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P06323 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Gm13884-201ENSMUST00000118103 829 ntBASIC11.7□□□□□ -0.54
P06323 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.7□□□□□ -0.54
P06323 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.7□□□□□ -0.54
P06323 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.7□□□□□ -0.54
P06323 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P06323 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06323 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms