Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.49■□□□□ 0.07
Chrna1P04756 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.49■□□□□ 0.07
Chrna1P04756 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chrna1P04756 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.49■□□□□ 0.07
Chrna1P04756 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.48■□□□□ 0.07
Chrna1P04756 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.48■□□□□ 0.07
Chrna1P04756 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chrna1P04756 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Gm15957-201ENSMUST00000118893 974 ntBASIC15.48■□□□□ 0.07
Chrna1P04756 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.48■□□□□ 0.07
Chrna1P04756 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.48■□□□□ 0.07
Chrna1P04756 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Chrna1P04756 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.48■□□□□ 0.07
Chrna1P04756 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Chrna1P04756 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna1P04756 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chrna1P04756 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chrna1P04756 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
Chrna1P04756 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.47■□□□□ 0.07
Chrna1P04756 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chrna1P04756 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Chrna1P04756 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Gm11424-201ENSMUST00000121929 829 ntBASIC15.47■□□□□ 0.07
Chrna1P04756 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.47■□□□□ 0.07
Chrna1P04756 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.47■□□□□ 0.07
Chrna1P04756 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chrna1P04756 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Chrna1P04756 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Chrna1P04756 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.47■□□□□ 0.07
Chrna1P04756 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.47■□□□□ 0.07
Chrna1P04756 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.47■□□□□ 0.07
Chrna1P04756 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
Chrna1P04756 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Chrna1P04756 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna1P04756 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Chrna1P04756 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.46■□□□□ 0.07
Chrna1P04756 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.46■□□□□ 0.07
Chrna1P04756 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.46■□□□□ 0.07
Chrna1P04756 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.46■□□□□ 0.07
Chrna1P04756 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.46■□□□□ 0.07
Chrna1P04756 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.46■□□□□ 0.07
Chrna1P04756 Gm10766-202ENSMUST00000194123 606 ntBASIC15.46■□□□□ 0.07
Chrna1P04756 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.46■□□□□ 0.07
Chrna1P04756 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Chrna1P04756 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.46■□□□□ 0.07
Chrna1P04756 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Chrna1P04756 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna1P04756 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.46■□□□□ 0.06
Chrna1P04756 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna1P04756 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna1P04756 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna1P04756 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna1P04756 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna1P04756 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms