Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.49□□□□□ -0.41
Igh-VJ558P01758 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Rprl2-201ENSMUST00000157150 290 ntBASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.48□□□□□ -0.41
Igh-VJ558P01758 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.48□□□□□ -0.41
Igh-VJ558P01758 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igh-VJ558P01758 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm43514-201ENSMUST00000198852 424 ntBASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igh-VJ558P01758 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igh-VJ558P01758 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igh-VJ558P01758 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Igh-VJ558P01758 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.46□□□□□ -0.41
Igh-VJ558P01758 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms