Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.85■□□□□ 0.13
Trdmt1O55055 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.85■□□□□ 0.13
Trdmt1O55055 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.85■□□□□ 0.13
Trdmt1O55055 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trdmt1O55055 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trdmt1O55055 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trdmt1O55055 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trdmt1O55055 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trdmt1O55055 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trdmt1O55055 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trdmt1O55055 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trdmt1O55055 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trdmt1O55055 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trdmt1O55055 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.84■□□□□ 0.13
Trdmt1O55055 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trdmt1O55055 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trdmt1O55055 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.84■□□□□ 0.13
Trdmt1O55055 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trdmt1O55055 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trdmt1O55055 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trdmt1O55055 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trdmt1O55055 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trdmt1O55055 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trdmt1O55055 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trdmt1O55055 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trdmt1O55055 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trdmt1O55055 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trdmt1O55055 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trdmt1O55055 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trdmt1O55055 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trdmt1O55055 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trdmt1O55055 Gm5425-201ENSMUST00000214125 459 ntBASIC15.83■□□□□ 0.12
Trdmt1O55055 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Trdmt1O55055 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trdmt1O55055 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trdmt1O55055 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
Trdmt1O55055 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.82■□□□□ 0.12
Trdmt1O55055 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.82■□□□□ 0.12
Trdmt1O55055 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.82■□□□□ 0.12
Trdmt1O55055 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.82■□□□□ 0.12
Trdmt1O55055 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.82■□□□□ 0.12
Trdmt1O55055 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.82■□□□□ 0.12
Trdmt1O55055 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms