Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm7461-201ENSMUST00000058918 827 ntBASIC13.15□□□□□ -0.3
Matn3O35701 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Matn3O35701 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Matn3O35701 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Matn3O35701 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.15□□□□□ -0.31
Matn3O35701 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Matn3O35701 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Matn3O35701 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Matn3O35701 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Matn3O35701 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.14□□□□□ -0.31
Matn3O35701 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Matn3O35701 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Matn3O35701 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.14□□□□□ -0.31
Matn3O35701 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Matn3O35701 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.14□□□□□ -0.31
Matn3O35701 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.14□□□□□ -0.31
Matn3O35701 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Matn3O35701 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.14□□□□□ -0.31
Matn3O35701 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Matn3O35701 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Matn3O35701 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Matn3O35701 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.13□□□□□ -0.31
Matn3O35701 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Matn3O35701 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Matn3O35701 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Matn3O35701 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.13□□□□□ -0.31
Matn3O35701 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Matn3O35701 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Matn3O35701 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.13□□□□□ -0.31
Matn3O35701 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Matn3O35701 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
Matn3O35701 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms