Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.13□□□□□ -0.15
Npc1O35604 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Npc1O35604 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.13□□□□□ -0.15
Npc1O35604 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.13□□□□□ -0.15
Npc1O35604 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.13□□□□□ -0.15
Npc1O35604 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Npc1O35604 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Npc1O35604 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Npc1O35604 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Npc1O35604 Gm8749-201ENSMUST00000117737 331 ntBASIC14.13□□□□□ -0.15
Npc1O35604 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.13□□□□□ -0.15
Npc1O35604 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Gm25925-201ENSMUST00000158314 306 ntBASIC14.13□□□□□ -0.15
Npc1O35604 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.13□□□□□ -0.15
Npc1O35604 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.13□□□□□ -0.15
Npc1O35604 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Npc1O35604 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.12□□□□□ -0.15
Npc1O35604 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.12□□□□□ -0.15
Npc1O35604 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Gm5479-201ENSMUST00000160578 435 ntBASIC14.12□□□□□ -0.15
Npc1O35604 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Gm25948-201ENSMUST00000175334 112 ntBASIC14.12□□□□□ -0.15
Npc1O35604 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.12□□□□□ -0.15
Npc1O35604 Mir6956-201ENSMUST00000183598 62 ntBASIC14.12□□□□□ -0.15
Npc1O35604 Gm9182-201ENSMUST00000217829 639 ntBASIC14.12□□□□□ -0.15
Npc1O35604 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.12□□□□□ -0.15
Npc1O35604 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.12□□□□□ -0.15
Npc1O35604 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Npc1O35604 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.12□□□□□ -0.15
Npc1O35604 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Npc1O35604 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npc1O35604 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Npc1O35604 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.11□□□□□ -0.15
Npc1O35604 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Gm15693-201ENSMUST00000120470 637 ntBASIC14.11□□□□□ -0.15
Npc1O35604 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Gm23547-201ENSMUST00000158210 271 ntBASIC14.11□□□□□ -0.15
Npc1O35604 Gm45098-201ENSMUST00000207179 657 ntBASIC14.11□□□□□ -0.15
Npc1O35604 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.11□□□□□ -0.15
Npc1O35604 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.11□□□□□ -0.15
Npc1O35604 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npc1O35604 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms