Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Efnb3O35393 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.43□□□□□ -0.58
Efnb3O35393 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.43□□□□□ -0.58
Efnb3O35393 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.43□□□□□ -0.58
Efnb3O35393 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.43□□□□□ -0.58
Efnb3O35393 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.43□□□□□ -0.58
Efnb3O35393 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Efnb3O35393 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.43□□□□□ -0.58
Efnb3O35393 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.43□□□□□ -0.58
Efnb3O35393 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.43□□□□□ -0.58
Efnb3O35393 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Efnb3O35393 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Efnb3O35393 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Efnb3O35393 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.42□□□□□ -0.58
Efnb3O35393 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.42□□□□□ -0.58
Efnb3O35393 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Efnb3O35393 Gm9726-201ENSMUST00000180321 678 ntBASIC11.42□□□□□ -0.58
Efnb3O35393 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.42□□□□□ -0.58
Efnb3O35393 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.42□□□□□ -0.58
Efnb3O35393 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.42□□□□□ -0.58
Efnb3O35393 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Efnb3O35393 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Efnb3O35393 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Efnb3O35393 Acot6-202ENSMUST00000222921 3622 ntBASIC11.42□□□□□ -0.58
Efnb3O35393 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Efnb3O35393 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.41□□□□□ -0.58
Efnb3O35393 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Efnb3O35393 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Efnb3O35393 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Efnb3O35393 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.41□□□□□ -0.58
Efnb3O35393 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Efnb3O35393 Gm11780-201ENSMUST00000136880 516 ntBASIC11.41□□□□□ -0.58
Efnb3O35393 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.41□□□□□ -0.58
Efnb3O35393 Mir8098-201ENSMUST00000184011 137 ntBASIC11.41□□□□□ -0.58
Efnb3O35393 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.41□□□□□ -0.58
Efnb3O35393 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.41□□□□□ -0.58
Efnb3O35393 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.41□□□□□ -0.58
Efnb3O35393 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms