Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Gm18766-201ENSMUST00000189811 808 ntBASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Tnfrsf11aO35305 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Mir449b-201ENSMUST00000104833 80 ntBASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Tnfrsf11aO35305 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Gm18049-201ENSMUST00000208909 581 ntBASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf11aO35305 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf11aO35305 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Gm24158-201ENSMUST00000175263 71 ntBASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Gm9824-201ENSMUST00000178707 561 ntBASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf11aO35305 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms