Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ebf3O08791 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Ebf3O08791 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
Ebf3O08791 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Gm14719-201ENSMUST00000121891 340 ntBASIC15.02■□□□□ -0
Ebf3O08791 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.02■□□□□ -0
Ebf3O08791 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Gm27680-201ENSMUST00000184192 160 ntBASIC15.02■□□□□ -0
Ebf3O08791 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.02■□□□□ -0
Ebf3O08791 Gm44855-201ENSMUST00000205725 362 ntBASIC15.02■□□□□ -0
Ebf3O08791 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.02■□□□□ -0
Ebf3O08791 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf3O08791 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ebf3O08791 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ebf3O08791 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf3O08791 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf3O08791 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ebf3O08791 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ebf3O08791 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf3O08791 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ebf3O08791 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.02□□□□□ -0.01
Ebf3O08791 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ebf3O08791 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Ebf3O08791 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ebf3O08791 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ebf3O08791 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ebf3O08791 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.01□□□□□ -0.01
Ebf3O08791 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ebf3O08791 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ebf3O08791 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ebf3O08791 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ebf3O08791 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ebf3O08791 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15□□□□□ -0.01
Ebf3O08791 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ebf3O08791 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Syt7-204ENSMUST00000223586 1344 ntBASIC15□□□□□ -0.01
Ebf3O08791 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ebf3O08791 Gm24543-201ENSMUST00000103867 82 ntBASIC15□□□□□ -0.01
Ebf3O08791 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Ebf3O08791 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Gm7488-201ENSMUST00000117148 684 ntBASIC15□□□□□ -0.01
Ebf3O08791 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15□□□□□ -0.01
Ebf3O08791 Gm5479-201ENSMUST00000160578 435 ntBASIC15□□□□□ -0.01
Ebf3O08791 Gm9719-201ENSMUST00000162765 543 ntBASIC15□□□□□ -0.01
Ebf3O08791 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ebf3O08791 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15□□□□□ -0.01
Ebf3O08791 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15□□□□□ -0.01
Ebf3O08791 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15□□□□□ -0.01
Ebf3O08791 AC124732.1-201ENSMUST00000221551 910 ntBASIC15□□□□□ -0.01
Ebf3O08791 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15□□□□□ -0.01
Ebf3O08791 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms