Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tcof1O08784 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tcof1O08784 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.91■□□□□ 0.3
Tcof1O08784 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.91■□□□□ 0.3
Tcof1O08784 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tcof1O08784 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tcof1O08784 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.91■□□□□ 0.3
Tcof1O08784 Gm12428-201ENSMUST00000119844 727 ntBASIC16.91■□□□□ 0.3
Tcof1O08784 Gm6222-201ENSMUST00000120787 396 ntBASIC16.91■□□□□ 0.3
Tcof1O08784 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.91■□□□□ 0.3
Tcof1O08784 Gm17837-201ENSMUST00000186435 985 ntBASIC16.91■□□□□ 0.3
Tcof1O08784 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.91■□□□□ 0.3
Tcof1O08784 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcof1O08784 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.9■□□□□ 0.3
Tcof1O08784 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Tcof1O08784 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Gm25144-201ENSMUST00000179561 110 ntBASIC16.9■□□□□ 0.3
Tcof1O08784 Gm25352-201ENSMUST00000179815 110 ntBASIC16.9■□□□□ 0.3
Tcof1O08784 Gm27631-201ENSMUST00000184163 466 ntBASIC16.9■□□□□ 0.3
Tcof1O08784 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.9■□□□□ 0.3
Tcof1O08784 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tcof1O08784 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tcof1O08784 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tcof1O08784 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcof1O08784 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Tcof1O08784 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tcof1O08784 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Tcof1O08784 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tcof1O08784 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.89■□□□□ 0.29
Tcof1O08784 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.89■□□□□ 0.29
Tcof1O08784 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.89■□□□□ 0.29
Tcof1O08784 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.89■□□□□ 0.29
Tcof1O08784 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tcof1O08784 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Tcof1O08784 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.89■□□□□ 0.29
Tcof1O08784 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tcof1O08784 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tcof1O08784 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tcof1O08784 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Tcof1O08784 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tcof1O08784 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.88■□□□□ 0.29
Tcof1O08784 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tcof1O08784 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tcof1O08784 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tcof1O08784 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tcof1O08784 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms