Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.69□□□□□ -0.22
Otud4B2RRE7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.69□□□□□ -0.22
Otud4B2RRE7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.69□□□□□ -0.22
Otud4B2RRE7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.69□□□□□ -0.22
Otud4B2RRE7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.69□□□□□ -0.22
Otud4B2RRE7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.69□□□□□ -0.22
Otud4B2RRE7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Otud4B2RRE7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Otud4B2RRE7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.68□□□□□ -0.22
Otud4B2RRE7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.68□□□□□ -0.22
Otud4B2RRE7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.68□□□□□ -0.22
Otud4B2RRE7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otud4B2RRE7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otud4B2RRE7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms