Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm12203-201ENSMUST00000118235 598 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm12209-201ENSMUST00000120089 596 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm45310-201ENSMUST00000210436 275 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm23153-201ENSMUST00000175323 313 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm38317-201ENSMUST00000195564 343 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Tfap2a-203ENSMUST00000223869 2037 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm13045-201ENSMUST00000119019 712 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm38223-201ENSMUST00000194484 695 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm44967-201ENSMUST00000207047 631 ntBASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC7.45□□□□□ -1.22
Ubr4A2AN08 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ubr4A2AN08 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm6152-201ENSMUST00000151704 340 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm23699-201ENSMUST00000158835 135 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm3028-201ENSMUST00000213805 1119 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 AC131330.1-201ENSMUST00000227814 1015 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm4775-201ENSMUST00000169588 402 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm29548-201ENSMUST00000187012 694 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm28105-201ENSMUST00000187788 694 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm17391-201ENSMUST00000171036 126 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm17330-201ENSMUST00000221047 165 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm10268-201ENSMUST00000085340 555 ntBASIC7.44□□□□□ -1.22
Ubr4A2AN08 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ubr4A2AN08 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm15036-201ENSMUST00000118880 400 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms