Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.03□□□□□ -0.16
Col9a3A2ACT7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.03□□□□□ -0.16
Col9a3A2ACT7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a3A2ACT7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a3A2ACT7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.02□□□□□ -0.17
Col9a3A2ACT7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a3A2ACT7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 AY702102-202ENSMUST00000194651 1173 ntBASIC14.01□□□□□ -0.17
Col9a3A2ACT7 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.01□□□□□ -0.17
Col9a3A2ACT7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a3A2ACT7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col9a3A2ACT7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col9a3A2ACT7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col9a3A2ACT7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col9a3A2ACT7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col9a3A2ACT7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col9a3A2ACT7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col9a3A2ACT7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col9a3A2ACT7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col9a3A2ACT7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms