Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.03□□□□□ -0.48
Trbv29A0A0G2LB96 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv29A0A0G2LB96 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv29A0A0G2LB96 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Gm2272-201ENSMUST00000194903 582 ntBASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 AV026068-213ENSMUST00000223675 1171 ntBASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv29A0A0G2LB96 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv29A0A0G2LB96 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms