Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44357-201ENSMUST00000195897 142 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm19658-201ENSMUST00000196231 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44367-201ENSMUST00000196836 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44350-201ENSMUST00000197197 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44390-201ENSMUST00000197533 144 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm6089-201ENSMUST00000197666 938 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44313-201ENSMUST00000198018 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44486-201ENSMUST00000198508 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44314-201ENSMUST00000199263 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44394-201ENSMUST00000199558 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44484-201ENSMUST00000199873 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44466-201ENSMUST00000200264 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44359-201ENSMUST00000200671 138 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm7787-201ENSMUST00000216858 688 ntBASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mmp14-206ENSMUST00000225641 3238 ntBASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav13d-4A0A0G2JFX3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm5682-201ENSMUST00000173402 505 ntBASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms