Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm12497-201ENSMUST00000138778 237 ntBASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms