Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.12□□□□□ -0.63
PdfS4R2K0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.12□□□□□ -0.63
PdfS4R2K0 Gm9172-201ENSMUST00000212092 954 ntBASIC11.12□□□□□ -0.63
PdfS4R2K0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.12□□□□□ -0.63
PdfS4R2K0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
PdfS4R2K0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
PdfS4R2K0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.12□□□□□ -0.63
PdfS4R2K0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.12□□□□□ -0.63
PdfS4R2K0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdfS4R2K0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm8825-201ENSMUST00000182565 998 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm4518-201ENSMUST00000182638 718 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.11□□□□□ -0.63
PdfS4R2K0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
PdfS4R2K0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdfS4R2K0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
PdfS4R2K0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms