Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk1bQ9Z2C6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk1bQ9Z2C6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk1bQ9Z2C6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk1bQ9Z2C6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms