Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Gm15460-201ENSMUST00000118147 391 ntBASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Gm2445-201ENSMUST00000182798 989 ntBASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn8aQ9WTU3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.46□□□□□ -0.1
Scn8aQ9WTU3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Scn8aQ9WTU3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn8aQ9WTU3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms