Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.12□□□□□ -0.15
Cdh17Q9R100 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.11□□□□□ -0.15
Cdh17Q9R100 Gm9385-201ENSMUST00000117563 472 ntBASIC14.11□□□□□ -0.15
Cdh17Q9R100 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Gm17968-201ENSMUST00000194902 784 ntBASIC14.11□□□□□ -0.15
Cdh17Q9R100 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.11□□□□□ -0.15
Cdh17Q9R100 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Cdh17Q9R100 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Gm5479-201ENSMUST00000160578 435 ntBASIC14.1□□□□□ -0.15
Cdh17Q9R100 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.1□□□□□ -0.15
Cdh17Q9R100 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdh17Q9R100 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms