Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Gm20482-202ENSMUST00000174729 825 ntBASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Gm29787-201ENSMUST00000222129 849 ntBASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Gm15782-201ENSMUST00000121073 445 ntBASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Itm2b-204ENSMUST00000228637 783 ntBASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a4Q9QZR9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Gm15370-201ENSMUST00000117158 253 ntBASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Gm29741-201ENSMUST00000192667 421 ntBASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Gm37497-201ENSMUST00000195830 798 ntBASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a4Q9QZR9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Gm10268-201ENSMUST00000085340 555 ntBASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms