Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trem1Q9JKE2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trem1Q9JKE2 Gm42632-201ENSMUST00000201707 2411 ntBASIC13□□□□□ -0.33
Trem1Q9JKE2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trem1Q9JKE2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trem1Q9JKE2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trem1Q9JKE2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trem1Q9JKE2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.99□□□□□ -0.33
Trem1Q9JKE2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trem1Q9JKE2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Gm6257-201ENSMUST00000163864 910 ntBASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Gm37722-201ENSMUST00000193757 208 ntBASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Gm44430-201ENSMUST00000203376 995 ntBASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trem1Q9JKE2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trem1Q9JKE2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms