Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Gm11025-201ENSMUST00000140773 466 ntBASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb3Q9ERD7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Gm14701-201ENSMUST00000117156 348 ntBASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb3Q9ERD7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Matn2-206ENSMUST00000228570 2798 ntBASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tubb3Q9ERD7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms