Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm1401-201ENSMUST00000122048 772 ntBASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Gm8584-201ENSMUST00000171982 758 ntBASIC16.91■□□□□ 0.3
Ccdc7Q9D541 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Gm6973-201ENSMUST00000117080 721 ntBASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc7Q9D541 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc7Q9D541 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc7Q9D541 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc7Q9D541 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc7Q9D541 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc7Q9D541 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms