Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx56Q9D0R4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Gm11745-201ENSMUST00000121669 448 ntBASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Rprl2-201ENSMUST00000157150 290 ntBASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx56Q9D0R4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx56Q9D0R4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ddx56Q9D0R4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx56Q9D0R4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx56Q9D0R4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx56Q9D0R4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx56Q9D0R4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx56Q9D0R4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx56Q9D0R4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx56Q9D0R4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms