Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim13Q9CYB0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim13Q9CYB0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim13Q9CYB0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim13Q9CYB0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim13Q9CYB0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.4□□□□□ -0.26
Trim13Q9CYB0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim13Q9CYB0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trim13Q9CYB0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.27
Trim13Q9CYB0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Trim13Q9CYB0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trim13Q9CYB0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.39□□□□□ -0.27
Trim13Q9CYB0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Gm12895-201ENSMUST00000122214 226 ntBASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim13Q9CYB0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Acot6-202ENSMUST00000222921 3622 ntBASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms