Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Gm13884-201ENSMUST00000118103 829 ntBASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Gm11764-201ENSMUST00000120221 623 ntBASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Gm4899-201ENSMUST00000178708 719 ntBASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssr1Q9CY50 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 AV026068-213ENSMUST00000223675 1171 ntBASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ssr1Q9CY50 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssr1Q9CY50 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms