Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 AA543401-201ENSMUST00000164248 1269 ntBASIC18.65■□□□□ 0.58
Rtn4Q99P72 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rtn4Q99P72 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Gm44607-201ENSMUST00000205611 1090 ntBASIC18.65■□□□□ 0.58
Rtn4Q99P72 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.65■□□□□ 0.58
Rtn4Q99P72 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.65■□□□□ 0.58
Rtn4Q99P72 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4Q99P72 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtn4Q99P72 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.64■□□□□ 0.58
Rtn4Q99P72 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtn4Q99P72 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtn4Q99P72 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.64■□□□□ 0.57
Rtn4Q99P72 Gm14057-201ENSMUST00000120631 482 ntBASIC18.64■□□□□ 0.57
Rtn4Q99P72 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Gm43244-201ENSMUST00000196994 1285 ntBASIC18.64■□□□□ 0.57
Rtn4Q99P72 Gm14005-208ENSMUST00000223654 681 ntBASIC18.64■□□□□ 0.57
Rtn4Q99P72 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4Q99P72 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.63■□□□□ 0.57
Rtn4Q99P72 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.63■□□□□ 0.57
Rtn4Q99P72 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Gm43974-201ENSMUST00000205080 684 ntBASIC18.63■□□□□ 0.57
Rtn4Q99P72 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.63■□□□□ 0.57
Rtn4Q99P72 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4Q99P72 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Mypopos-202ENSMUST00000205975 2321 ntBASIC18.62■□□□□ 0.57
Rtn4Q99P72 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.62■□□□□ 0.57
Rtn4Q99P72 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn4Q99P72 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.62■□□□□ 0.57
Rtn4Q99P72 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms