Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm37986-201ENSMUST00000193285 383 ntBASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Gm45880-201ENSMUST00000213041 853 ntBASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col25a1Q99MQ5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col25a1Q99MQ5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col25a1Q99MQ5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Gm6091-201ENSMUST00000098307 165 ntBASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Col25a1Q99MQ5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Gm8318-201ENSMUST00000182954 872 ntBASIC14.94□□□□□ -0.02
Col25a1Q99MQ5 Gm27514-201ENSMUST00000183692 110 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms