Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.68□□□□□ -0.22
Nkd1Q99MH6 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkd1Q99MH6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Gm5864-201ENSMUST00000202263 970 ntBASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkd1Q99MH6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Gm9726-201ENSMUST00000180321 678 ntBASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Gm17971-201ENSMUST00000190239 806 ntBASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkd1Q99MH6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms