Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Gm25911-201ENSMUST00000157621 56 ntBASIC15.06■□□□□ 0
Pcdhb1Q91Y08 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb1Q91Y08 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.05■□□□□ 0
Pcdhb1Q91Y08 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb1Q91Y08 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.05■□□□□ 0
Pcdhb1Q91Y08 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb1Q91Y08 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb1Q91Y08 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pcdhb1Q91Y08 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb1Q91Y08 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb1Q91Y08 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Gm10275-202ENSMUST00000168697 495 ntBASIC15.05■□□□□ -0
Pcdhb1Q91Y08 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Gm10275-201ENSMUST00000092620 635 ntBASIC15.05■□□□□ -0
Pcdhb1Q91Y08 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.05■□□□□ -0
Pcdhb1Q91Y08 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Gm2810-201ENSMUST00000118681 990 ntBASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb1Q91Y08 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms