Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb18Q91Y02 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Gm13464-201ENSMUST00000119418 935 ntBASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb18Q91Y02 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gm46209-201ENSMUST00000217912 553 ntBASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb18Q91Y02 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Gm15653-201ENSMUST00000119247 907 ntBASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb18Q91Y02 Gm24694-201ENSMUST00000180054 110 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms