Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Gm22175-201ENSMUST00000175007 78 ntBASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Efs-202ENSMUST00000227037 2540 ntBASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb2Q91Y00 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb2Q91Y00 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Gm6415-201ENSMUST00000118488 348 ntBASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Gm11434-201ENSMUST00000122379 629 ntBASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms