Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Gm13365-201ENSMUST00000121188 973 ntBASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb6Q91XZ4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Gm18889-201ENSMUST00000174284 929 ntBASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb6Q91XZ4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Gm38225-201ENSMUST00000194001 393 ntBASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb6Q91XZ4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb6Q91XZ4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms