Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb21Q91V48 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm15483-201ENSMUST00000120338 456 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm5479-201ENSMUST00000160578 435 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm43575-201ENSMUST00000196420 516 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm2451-201ENSMUST00000199447 999 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm10290-201ENSMUST00000200451 999 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb21Q91V48 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Mir6990-201ENSMUST00000183724 91 ntBASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Chchd1-203ENSMUST00000224633 557 ntBASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb21Q91V48 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms