Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.31■□□□□ 0.04
SfpqQ8VIJ6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SfpqQ8VIJ6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SfpqQ8VIJ6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SfpqQ8VIJ6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SfpqQ8VIJ6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Gm6376-201ENSMUST00000209407 580 ntBASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SfpqQ8VIJ6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Gm15173-201ENSMUST00000122049 433 ntBASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SfpqQ8VIJ6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Gm14042-201ENSMUST00000120139 833 ntBASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Gm7230-201ENSMUST00000173026 815 ntBASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Gm6550-201ENSMUST00000187574 993 ntBASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SfpqQ8VIJ6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms