Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Gm14701-201ENSMUST00000117156 348 ntBASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3a1Q8K4Z5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3a1Q8K4Z5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Gm13015-201ENSMUST00000118674 204 ntBASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3a1Q8K4Z5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sf3a1Q8K4Z5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Sf3a1Q8K4Z5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sf3a1Q8K4Z5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sf3a1Q8K4Z5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sf3a1Q8K4Z5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms