Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cchcr1Q8K2I2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Gm45747-201ENSMUST00000212203 999 ntBASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cchcr1Q8K2I2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Gm5479-201ENSMUST00000160578 435 ntBASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Gm37230-201ENSMUST00000194491 818 ntBASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cchcr1Q8K2I2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms